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custom
Zonari_mPBHSCexp_2025
Zonari_mPBHSCexp_2025_scRNAseq
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9befc892
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9befc892
authored
Aug 06, 2025
by
Matteo Barcella
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Update README.md
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@@ -26,6 +26,7 @@ HSC can engraft and allow long-term disease correction.
PubMed:
DOI:
GEO: GSE292604 and GSE292606 for Fig. 2H and Fig. 2C datasets respectively.
## Data analysis workflow
### Dataset Fig2C
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@@ -114,9 +115,9 @@ reference human genome in cellranger (10X Genomics). Transduction efficiency (TE
calculated as the fraction of cells bearing the WPRE transcripts within each sample and/or cell
population.
Code for performing quantification
, mapping and quantification
can be found in:
Code for performing quantification
and mapping
can be found in:
-
-
[
WPRE_quantification.R
](
http://www.bioinfotiget.it/gitlab/custom/zonari_mpbhscexp_2025/zonari_mpbhscexp_2025_scrnaseq/-/blob/main/WPRE_quantification.R
)
-
[
Fig2H.R
](
http://www.bioinfotiget.it/gitlab/custom/zonari_mpbhscexp_2025/zonari_mpbhscexp_2025_scrnaseq/-/blob/main/Fig2H.R
)
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