BAR-Seq: Analysis of HDR Barcoded Cells

Clonal Tracking of Cells Gene Edited by Homology-Directed Repair

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Nature Biotechnology

Efficient gene editing of human long-term hematopoietic stem cells validated by clonal tracking

Samuele Ferrari, Aurelien Jacob, Stefano Beretta, Giulia Unali, Luisa Albano, Valentina Vavassori, Davide Cittaro, Dejan Lazarevic, Chiara Brombin, Federica Cugnata, Anna Kajaste-Rudnitski, Ivan Merelli, Pietro Genovese, Luigi Naldini

Nature Biotechnology, pp. 1-11, (2020)

Nature Protocols

BAR-Seq clonal tracking of gene-edited cells

Samuele Ferrari, Stefano Beretta, Aurelien Jacob, Davide Cittaro, Luisa Albano, Ivan Merelli, Luigi Naldini, Pietro Genovese

Nature Protocols, (2021)

BAR-Seq Repository

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Bitbucket repository of the batch BAR-Seq bioinformatic pipeline

Useful to run BAR-Seq locally